Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888133.1_cds_XP_016442674.1_37913
CDS Infomation

[gene=LOC107768077] [db_xref=GeneID:107768077] [protein=MACPF domain-containing protein At4g24290-like] [protein_id=XP_016442674.1] [location=complement(join(13061..13744,15312..15478,15994..16180,18199..18267,19672..19849,20909..21147,21663..21923))] [gbkey=CDS]
Sequence

ATGGCGAACAAAGAGAGGGCGTTGAAACTAAGAGCAGCGGCGGAAGCGGCAGTGAAAGCA
ATAGGGTTAGGGTATGATATAGTGGATGACTTGAGGTTGAAGTATTGCAAGGAGGAGTGT
AGGTTGATCGCCATTGAGGATGATCAGGTGCGAGACATAGCTATTCCTGGGGGAATTTTG
GTTCAGAATGTTCCCAAGTCCATCCATTGCGATAAAGGCGACCGCATCAGATTTACTTCT
GATCTTCTCTCTTTCCAGCAGATGTCCGAACAATTTAACCAGGAAATGTCTCTTTCTGGT
AAAATTCCAAGTGGCCACTTCAATGCTGCTTTTGAATATACCACTTGTTGGCAAAAAGAC
GCCGCCTACACAAAAGCTCTTGCTTTTGACGGGGTCTTCATCACCCTCTACAATATTGCA
TTAGAGAAGGCTCAAGTTGCACTCAATGATCATGTTAAACAAGCTGTTCCTTCATCTTGG
GATCCAGCAGCGTTGGCAAGGTTTATTGAGAAATATGGTACCCATGTTGTTGTTGGTGTG
AAGATGGGGGGAAAGGATGTTGTATATGTAAAGCAGCAACATTCATCAACACTTCAGCCT
GCAGATGTACGGAAAATGTTGAAAGAAGTGGCAGACCAAGGATTTAGTGATGCAAATGAA
CAATCCAGCACTATACTGCTTGCTAATAGTGACCAAGGGCTGCCCTTTGTGGATTCCACT
ACGTCAACTCTTCATTTTCACAAAGAGGATATTACATTCCTCTGGAAGAGGAGAGGTGGA
AGCAGTATCAGAAATCTGCCACATAAAAGGTGGTATCAAACTGTTCCAATTGAACCTGAT
GTGATTTCAATGTCATTCATTCCAATATCATCATTATTGAGCGGGATTGATGGAAGTGGT
TTTTTGAGCCATGCAATTAACTTGTACATACGTTATAAACCACCAATTGAAGAGCTTTAT
CAGTTTTTGGAGTTTCAGCTTCCAAGGCAATGGGGACCTGTGTTTGGTGAACTTCCTCTT
GGTCCCGAGAGGAAGCAGCAAAGTGGTAAAACCCTGAAGTTCAGTTTAATGGGCCCCAAG
TTATATGTTAATACAAATCCGGTGGATGTGGGTAATAAGCCAGTCGTCGGCCTTCGATTG
TATTTGGAAGGCAAAAGAAGCAATTGCTTAGCAATCCATTTGCATCACCTTTCTTCCTTG
CCAAAAAGTCTTCAATTTCAGAATGAATCATATGGAGATGCCAGCAGCTCTTCTGACCGG
AGGTATTATGAGAAAGTCCAATGGAAGAGTTTTTCACATGTATGCACTGCCCCCGTAGAA
TCCGATGATGATTCCTCGATCGTCACAGGGGCCCAATTTGAAGTTGGAGAATCTGGTATG
AGAAATGTTCTTCTTTTACGCCTTAAGTTTTCCAAAGTATTAGGTGCCACAGTCATAAAG
AGACCTGAGTGGGATGGTTCCCCTGCTCAGACTGAAAAATCAGGAATCATCTCATCTATA
ATAAGTTCCCATTTTTCCTCCGCTCAAAAGCCATTGCCACGACCATCTGAAATTCACATA
AACTCTGCACTTTATCCGGATGGACCTCCAATGCCAGCACAAACCCGTAGACTCTTAAAG
TTCGTTGACACGACAGAGATGATGAGAGGACCCCAGGATCAACCTGGCTACTGGATGGTG
TCCGGGGCTAGGCTTGTAGTCGACAATGGTAAGATTTCTCTTCGTGTTAAGTTTTCTTTA
TTAGCTGTTGTCTTGCCAGATGAAGAGGAGCCATTGCAAGGCTAA

Peptide Sequence

PEP ID

XP_016442674.1
PEP Infomation

PREDICTED: MACPF domain-containing protein At4g24290-like [Nicotiana tabacum]
Sequence

MANKERALKLRAAAEAAVKAIGLGYDIVDDLRLKYCKEECRLIAIEDDQVRDIAIPGGIL
VQNVPKSIHCDKGDRIRFTSDLLSFQQMSEQFNQEMSLSGKIPSGHFNAAFEYTTCWQKD
AAYTKALAFDGVFITLYNIALEKAQVALNDHVKQAVPSSWDPAALARFIEKYGTHVVVGV
KMGGKDVVYVKQQHSSTLQPADVRKMLKEVADQGFSDANEQSSTILLANSDQGLPFVDST
TSTLHFHKEDITFLWKRRGGSSIRNLPHKRWYQTVPIEPDVISMSFIPISSLLSGIDGSG
FLSHAINLYIRYKPPIEELYQFLEFQLPRQWGPVFGELPLGPERKQQSGKTLKFSLMGPK
LYVNTNPVDVGNKPVVGLRLYLEGKRSNCLAIHLHHLSSLPKSLQFQNESYGDASSSSDR
RYYEKVQWKSFSHVCTAPVESDDDSSIVTGAQFEVGESGMRNVLLLRLKFSKVLGATVIK
RPEWDGSPAQTEKSGIISSIISSHFSSAQKPLPRPSEIHINSALYPDGPPMPAQTRRLLK
FVDTTEMMRGPQDQPGYWMVSGARLVVDNGKISLRVKFSLLAVVLPDEEEPLQG

Transcript Sequence

Gene sequence data has not been registered.